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Attribution-ShareAlike 4.0 International (CC BY-SA 4.0) (287)

DOI: 10.15493/dea.mims.01022028
Processed CTD discrete observations from the Africana Voyage 009, May 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here we present processed CTD discrete data from the upcast collected during Voyage 009 on the Africana, in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa, between 5 May 1983 and 29 May 1983.

DOI: 10.15493/dea.mims.01022022
Processed CTD continuous observations from the Africana Voyage 007, March 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here we present processed downcast CTD continuous data collected during Voyage 007 on the Africana, in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa, between 16 March 1983 and 21 March 1983.

DOI: 10.15493/dea.mims.01022023
Processed CTD discrete observations from the Africana Voyage 007, March 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here we present processed CTD discrete data from the upcast collected during Voyage 007 on the Africana, in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa, between 16 March 1983 and 21 March 1983.

DOI: 10.15493/dea.mims.26052362
Processed CTD continuous observations from the Africana Voyage 006, February 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here, we present processed downcast CTD continuous data collected between 22 February 1983 and 28 February 1983 during Voyage 006 on the Africana in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa.

DOI: 10.15493/dea.mims.26052363
Processed CTD discrete observations from the Africana Voyage 006, February 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here, we present processed CTD discrete data from the upcast collected between 22 February 1983 and 28 February 1983 during Voyage 006 on the Africana in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa.

DOI: 10.15493/dea.mims.26500019
Carbonate chemistry time-series from discrete sampling at thirteen sites in Algoa Bay, South Africa, 2018 - 2020

Coastal monthly carbonate chemistry data and other associated physico-chemical parameters from Algoa Bay, on the temperate south coast of South Africa. Eight offshore and five inshore sites were sampled. Temperature, salinity and dissolved oxygen were measured at each offshore site, and temperature was measured at each inshore site. At each offshore and inshore site, a single sea water sample was collected at the surface for later analysis of pH and total alkalinity (TA) in the laboratory. Remaining parameters of the carbonate system (including pCO2) were calculated in the software program CO2SYS (Lewis and Wallace, 1998) using pH and TA as input parameters. Temperature, salinity, silicate and phosphate concentrations were included in the calculations as supplemental data which may influence carbonate speciation.

DOI: 10.15493/DEA.MIMS.15712023
Simulated advection patterns of Engraulis encrasicolus and Sardinops sagax larvae across South Africa's inshore Marine Protected Areas

Larval anchovy and sardine dispersal patterns in South Africa's exclusive economic zone (2010 - 2014) by Rasehlomi et al. (2025), published in Frontiers in Marine Science, investigates the dispersal of larval anchovy and sardine (https://doi.org/10.3389/fmars.2024.1508479). We simulated larval dispersal patterns using a simplified model within the Java-based ICHTHYOP particle tracking tool. This model compared outputs from the 3km grid resolution CROCO model and the 8km-resolution Global Ocean Reanalyses (GLORYS). Virtual particles were released from the surface of 14 inshore Marine Protected Areas (MPAs), from iSimangaliso MPA (on the east coast) including the Agulhas Bank (on the south) to Childs Bank MPA (on the west coast). Releases occurred on October 1st for five consecutive years, starting in 2010. These particles drifted for 30 days, with their positions recorded every 30 minutes. Particles that exited the model's boundaries or became stranded on beaches were excluded from...

DOI: 10.15493/DEA.MIMS.12652023
Cape Canyon Suspended Particulate Matter CTD water sample

The Cape Canyon, situated on the western continental shelf of South Africa, stands as the country's largest bathymetric feature. Despite its prominence, understanding of the food web dynamics within the system and the significance of the benthic community for higher trophic levels remains incomplete. In response to this knowledge gap, the DFFE: Oceans and Coasts launched a multidisciplinary expedition aboard the RV Algoa. The expedition aimed to characterise the physical environment and investigate food web connections in the vicinity of the Cape Canyon by analysing isotopic signatures in suspended particulate matter (SPM) relative to those found in benthic tissue samples. Prior to dredge operations, conductivity, temperature, and depth (CTD) water samples were collected at each dredge station. However, due to the inherent challenges associated with sampling in canyon systems, not all dredge operations were successful in obtaining samples, resulting in an unbalanced design where...

DOI: 10.15493/DEA.MIMS.05322023
Benthic invertebrate presence data, in and around the Cape Canyon (Southern Benguela Upwelling region)

Canyon research is still an emergent field in South Africa and the true potential of canyons as biodiversity hotspots has seldom been studied in an integrated context. In response to this, the Department of Forestry, Fisheries and the Environment: Oceans and Coasts collected benthic data to better understand benthic species profiles within and around the Cape Canyon. This equated to 39 stations (whereby 13 were canyon and 26 non-canyon) and yielded 180 species.

DOI: 10.15493/DEA.MIMS.26052100
Wirewalker wave-powered profilers from three nearshore moorings in St Helena Bay, South Africa, Feb-Apr 2011

Concurrent nearshore measurements of temperature, salinity, and chlorophyll fluorescence from three moorings offshore of Elands Bay, within St Helena Bay, Southern Benguela, in water depths of ~22 m (mooring 3), ~50 m (mooring 2) and ~62 m (mooring 1). The data were originally presented in "Lucas, A. J., Pitcher, G. C., Probyn, T. A., & Kudela, R. M. (2014, March). The influence of diurnal winds on phytoplankton dynamics in a coastal upwelling system off south -western Africa. Deep Sea Research Part II: Topical Studies in Oceanography,101,50–62. doi: 10.1016/j.dsr2.2013.01.016", and were further investigated in "Fearon, G., Herbette, S., Veitch, J., Cambon, G., Lucas, A. J., Lemarié, F., & Vichi, M. (2020). Enhanced vertical mixing in coastal upwelling systems driven by diurnal‐inertial resonance: Numerical experiments. Journal of Geophysical Research: Oceans, 125, e2020JC016208. https://doi.org/10.1029/2020JC016208".

DOI: 10.15493/DEA.MIMS.26052101
Bottom-mounted Acoustic Doppler Current Profilers (ADCP) from three nearshore moorings in St Helena Bay, South Africa, Feb-Apr 2011

Concurrent nearshore measurements of current velocity from three moorings offshore of Elands Bay, within St Helena Bay, Southern Benguela, in water depths of ~22 m (mooring 3), ~50 m (mooring 2) and ~62 m (mooring 1). The data were originally presented in "Lucas, A. J., Pitcher, G. C., Probyn, T. A., & Kudela, R. M. (2014, March). The influence of diurnal winds on phytoplankton dynamics in a coastal upwelling system off south-western Africa. Deep Sea Research Part II: Topical Studies in Oceanography,101,50–62. doi: 10.1016/j.dsr2.2013.01.016", and were further investigated in "Fearon, G., Herbette, S., Veitch, J., Cambon, G., Lucas, A. J., Lemarié, F., & Vichi, M. (2020). Enhanced vertical mixing in coastal upwelling systems driven by diurnal‐inertial resonance: Numerical experiments. Journal of Geophysical Research: Oceans, 125, e2020JC016208. https://doi.org/10.1029/2020JC016208".

DOI: 10.15493/DEA.MIMS.26052102
A stand alone 1D-vertical version of the Coastal and Regional Ocean COmmunity model (CROCO)

A 1D-vertical model originally developed by Florian Lemarie to test different vertical mixing parameterisations implemented in the full version of the CROCO source code. The model is run as a python script, simplifying the setup and testing of different 1D model configurations. The python script loops through time and calls a 1D version of the CROCO Fortran code at each time-step. A description of the input variables and how to implement the code is provided in scm_oce.pdf. Some examples of how the model has been used to benchmark oceanic vertical mixing parameterization against standard test cases is provided in comodo_params.pdf. The provided example configuration is described in "Fearon, G., Herbette, S., Veitch, J., Cambon, G., Lucas, A. J., Lemarié, F., & Vichi, M. (2020). Enhanced vertical mixing in coastal upwelling systems driven by diurnal‐inertial resonance: Numerical experiments. Journal of Geophysical Research: Oceans, 125, e2020JC016208. https://doi.org/10.1029/2020JC016208".

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